Flux balance analysis with or without molecular crowding fails to predict two thirds of experimentally observed epistasis in yeast | Scientific Reports
Conceptual architecture of the MEWpy framework. Phenotype prediction... | Download Scientific Diagram
Simulate models — cameo 0.13.6 documentation
Essentiality of local topology and regulation in kinetic metabolic modeling | bioRxiv
Stoichiometric Representation of Gene–Protein–Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction | PLOS Computational Biology
ΔFBA—Predicting metabolic flux alterations using genome-scale metabolic models and differential transcriptomic data | PLOS Computational Biology
FBA, MOMA and PSEUDO approaches to predicting metabolic fluxes. (A) In... | Download Scientific Diagram
FBA, MOMA and PSEUDO approaches to predicting metabolic fluxes. (A) In... | Download Scientific Diagram
Emergent sub-population behavior uncovered with a community dynamic metabolic model of Escherichia coli diauxic growth | bioRxiv
FBA, MOMA and PSEUDO approaches to predicting metabolic fluxes. (A) In... | Download Scientific Diagram
Metabolic Adaptation Processes That Converge to Optimal Biomass Flux Distributions | PLOS Computational Biology
Exploring gene knockout strategies to identify potential drug targets using genome-scale metabolic models | Scientific Reports
Turnover Dependent Phenotypic Simulation: A Quantitative Constraint-Based Simulation Method That Accommodates All Main Strain Design Strategies | ACS Synthetic Biology
OPTFLUX 3 Beginner's tutorial
cameo/03-simulate-models.rst at devel · biosustain/cameo · GitHub
Machine learning-guided evaluation of extraction and simulation methods for cancer patient-specific metabolic models - ScienceDirect
Machine learning-guided evaluation of extraction and simulation methods for cancer patient-specific metabolic models - ScienceDirect
Frontiers | Constraint-Based Reconstruction and Analyses of Metabolic Models: Open-Source Python Tools and Applications to Cancer
PSEUDO growth predictions fall between FBA and MOMA. Predicted and... | Download Scientific Diagram
Stoichiometric Representation of Gene–Protein–Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction | PLOS Computational Biology
Essentiality of local topology and regulation in kinetic metabolic modeling | bioRxiv
Stoichiometric Representation of Gene–Protein–Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction | PLOS Computational Biology
Improving the flux distributions simulated with genome-scale metabolic models of Saccharomyces cerevisiae - ScienceDirect
FBA, MOMA and PSEUDO approaches to predicting metabolic fluxes. (A) In... | Download Scientific Diagram
Flux balance analysis with or without molecular crowding fails to predict two thirds of experimentally observed epistasis in yeast | Scientific Reports
Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories | ACS Synthetic Biology
